High prevalence of hepatitis A and E viruses in environmental and clinical samples from West Argentina

ABSTRACT Environmental surveillance of water sources is important to monitoring viral hepatitis transmission in clinical settings. This study investigated the circulation of hepatitis A (HAV) and E (HEV) viruses in sewage and clinical samples from Argentina. Between 2016 and 2017, 80 raw sewage samples and 86 clinical samples (stool and serum) from suspected cases of hepatitis A and hepatitis E were obtained. HAV and HEV were tested by both real-time and nested PCR. Positive samples were sequenced for genotype determination and phylogenetic analysis. Overall, HAV was recovered in 39% of sewage samples and 61.1% of clinical samples. HEV was detected in 22.5% of sewage samples and 15.9% of clinical samples. HAV was found more frequently in sewage during the winter and in clinical samples in spring; HEV was more prevalent in sewage during summer and in clinical samples in autumn. All HAV isolates belonged to genotype IA and HEV isolates belonged to genotype 3, the most prevalent genotypes in South America. High prevalence of HAV and HEV in environmental and clinical samples in Mendoza, Argentina was observed. These findings reinforce the importance of environmental surveillance and implementation of health strategies to control the spread of HAV and HEV in developing countries.

Os genótipos do vírus da hepatite B na África e no Brasil: evolução, disseminação e associação com a rota de escravos / The genotypes of hepatitis B virus in Africa and in Brazil: evolution, spread and association with the route of slaves

A infecção pelo vírus da hepatite B (HBV) representa um grave problema de saúde públicamundial, apesar da existência de uma vacina eficiente. Estima-se que cerca de 350 milhõesde indivíduos no mundo estejam cronicamente infectados, dos quais a maior parte seencontra em países em desenvolvimento. A heterogeneidade das sequências dos isoladosdo HBV permite a sua classificação em oito genótipos, A a H, baseada na divergência do genoma completo de mais de 7,5 por cento. A presente tese é composta principalmente de três manuscritos, sendo um trabalho publicado e dois outros em submissão, além de cinco trabalhos como colaboradora. Esses estudos se propuseram a investigar a evolução dos genótipos do HBV entre África e Brasil e associar a dispersão dos genótipos no Brasil com a rota de escravos. No primeiro trabalho, entitulado Analysis of Complete NucleotideSequences of Angolan Hepatitis B Virus Isolates Reveals the Existence of a SeparateLineage within Genotype E, realizamos a caracterização filogenética viral dos isolados circulantes em Angola e sua associação com os perfis sorológicos e moleculares existentes naquela população. Através dessas análises, identificamos a separação das amostrasangolanas como pertencentes a uma nova linhagem, composta por Angola, Namibia eRepublica Democratica do Congo, provisoriamente denominada pela nossa equipe, SWL(Southwest African Lineage). No segundo trabalho, entitulado HBV subgenotype A1:Relationships between Brazilian, African and Asian isolates, fomos em busca das históriaevolutiva do HBV/A1, e suas suas rotas de dispersão entre África e Brasil durante o período do tráfico negreiro. Surpreendentemente, observamos que todas as amostras brasileiras estão geneticamente relacionadas às amostras da Ásia, ao invés da África. Esse fato sugere quer que o HBV/A1 possa ter sido introduzino no Brasil a partir dos portos de Moçambique,no sudeste africano, ou diretamente atravpés da Índia por navegantes portugueses...

Hepatitis B virus (HBV) infection is one of the major global human health problems, despitethe existence of an effective vaccine. It is estimated that around 350 million people worldwideare chronically infected; most of them is in developing countries. The sequenceheterogeneity of HBV isolates has led to the classification of HBV into eight genotypes, A toH, based on full-length genomic divergence of more than 7.5 percent. This thesis is composedmainly of three manuscripts: One of them is already published and two others are insubmission. Five other manuscripts are listed as complementary production. These studieshave set out to understand the evolution of HBV genotypes between Africa and Brazil andassociate its dispersion with slave routes. In the first study, entitled Analysis of CompleteNucleotide Sequences of Hepatitis B Virus Isolates Angolan Reveals the Existence of aSeparate Lineage Within Genotype E , performed the phylogenetic characterization of viralisolates circulating in Angola and its association with serological and molecular profiles.Through these analyzes, we characterized a separated lineage composed by Angolan,Namibia and Democratic Republic of Congo, provisionally named by our team as SWL(Southwest African Lineage). In the second paper, entitled Hepatitis B virus subgenotypeA1: Relationships between Brazilian, African and Asian isolates we aimed investigate theevolutionary history and migration patterns of HBV/A1 from Africa to Brazil during the slavetrade. Surprisingly, was observed that all Brazilian samples are genetically related to Asianisolates, rather than the African ones. These finds suggest that Asia was the source ofHBV/A1 infection in Brazil, probably through Mozambique in southeastern Africa, or directlythrough India by Portuguese sailors...

Epidemiology and molecular characterization of hepatitis B virus in Luanda, Angola

An estimated 360 million people are infected with hepatitis B virus (HBV) worldwide. Among these, 65 million live in Africa. Despite the high levels of hepatitis B in Africa, HBV epidemiology is still poorly documented in most African countries. In this work, the epidemiological and molecular characteristics of HBV infection were evaluated among the staff, visitors and adult patients (n = 508) of a public hospital in Luanda, Angola. The overall prevalence of hepatitis B core antibody (anti-HBc) and hepatitis B surface antigen was 79.7 percent and 15.1 percent, respectively. HBV infection was higher in males and was more prevalent in individuals younger than 50 years old. HBV-DNA was detected in 100 percent of HBV "e" antigen-positive serum samples and in 49 percent of anti-hepatitis Be antibody-positive samples. Thirty-five out of the 40 HBV genotypes belonged to genotype E. Circulation of genotypes A (4 samples) and D (1 sample) was also observed. The present study demonstrates that HBV infection is endemic in Luanda, which has a predominance of genotype E. This genotype is only sporadically found outside of Africa and is thought to have emerged in Africa at a time when the trans-Atlantic slave trade had stopped.

Fulminant hepatitis failure in adults and children from a Public Hospital in Rio de Janeiro, Brazil

Fulminant hepatic failure (FHF) is characterized by massive hepatocellular injury, whose physiopathology is still unclear. Hepatitis B (HBV) is probably the most common viral cause of FHF, while hepatitis A (HAV) virus seem occurs less frequently. However, the host and viral factors that determine the outcome of these infections are poorly understood. In the present study, viral load and genotyping determining regions of HAV and HBV genomes were sequenced. Eight FHF patients and one patient with severe acute hepatitis (SAH) were included. Liver and blood samples were collected during liver transplantation or necropsy procedures. HAV-RNA and HBV-DNA were extracted from serum, biopsy and paraffin liver. Nucleotide sequencing of HAV-RNA was performed from VP1/2A and HBV-DNA from PreS/S region. The amplified samples were quantified by Real-Time PCR. The cases of HAV infection were due to subgenotype IA. The cases of HBV infection were due to genotype A2 and D4. The case of HAV/HBV coinfection was infected by genotype IA and D3. Hepatitis A and B infection were associated with genotypes most prevalent in Brazil. In hepatitis A infection the mean of period evolution was 13 days. In hepatitis B, FHF patients infected by genotype D have a shorter period of evolution than FHF patients infected by genotype A (mean 15 v. 53 days). There was no association with genotype-determining region with the severity of hepatitis, however nucleotide differences and high viral load could be observed among FHF.